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Home » Resource Types » Databases » Pathogens

Pathogens Databases

General
Bacteria
E. coli
Campylobacter
Listeria
Salmonella
Other Bacteria
Prions
Other Pathogens

General

Format	Author(s)	Title / Description	Date added	Details
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Animal Disposition Reporting System (ADRS) Slaughter totals and disposition summaries for federally inspected livestock and poultry slaughter establishments. (more)	Aug 8, 2002
	Communicable Disease Surveillance Centre, Health Protection Agency	CDR Weekly Weekly electronic bulletin that publishes public health news and microbiological and epidemiological data and reports (more)	Sep 5, 2003
	Eastern Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture/United Kingdom Food Standards Agency/Institute of Food Research	ComBase Database of predictive microbiology information collected from researchers, institutions, and published literature. (more)	Jul 14, 2003
	Economic Research Service, U.S. Department of Agriculture/Market Research Corporation of America	Data: Hamburger Doneness and Consumer Preferences This site provides downloadable datasets collected by the Market Research Corporation of America for the ERS. There (more) Publication Month: May 2002	Oct 7, 2002
	Economic Research Service, U.S. Department of Agriculture	Foodborne Illness Cost Calculator Tool for estimating the costs of illness for selected foodborne illnesses. Assumptions used in the estimate may be (more)	Jun 5, 2003
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	Leatherhead Food International	FoodlineWeb This site provides news and events related to the food and drink industries. It also hosts several databases (more)	Oct 21, 2002
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Healthy People . . . tracking the Nation's health This page provides data, documentation, and publications from Healthy People 2010 and Healthy People 2000. Focus (more)	Jul 17, 2002
	American Society for Microbiology	MicrobeLibrary.org Digital library of images, curriculum resources, reviews, and articles related to microbiology. The primary audience (more)	Jan 2, 2003
	Federal Geographic Data Committee	National Geospatial Data Clearinghouse Clearinghouse that allows one to simultaneously search multiple data servers for geospatial data on a variety of (more)	Oct 16, 2003

Bacteria

Campylobacter

Format	Author(s)	Title / Description	Date added	Details
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Food and Drug Safety Priority Area 12 Data used for the Food and Drug Safety Progress Review, including data on infections from foodborne Salmonella, (more)	May 28, 2002
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	COST 920 Working Group 3: Quantitative Risk Assessment, COST Action 920	Inventory of QMRA Studies in Europe Listing of quantitative microbiological risk assessments, organized by pathogen and country. Links to further (more)	Feb 8, 2005
	European Union Risk Analysis Information Network	Risk Assessment Database Database of data and study outcomes related to food safety risk assessment. Includes information on Salmonella, (more)	Oct 8, 2004

E. Coli

Format	Author(s)	Title / Description	Date added	Details
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Food and Drug Safety Priority Area 12 Data used for the Food and Drug Safety Progress Review, including data on infections from foodborne Salmonella, (more)	May 28, 2002
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	Food Safety and Inspection Service, U.S. Department of Agriculture	Generic E. coli and Salmonella Baseline Results FSIS is releasing its data regarding E. coli and Salmonella from studies conducted between 1997 and 2000. This notice (more) Publication Date: Thursday, February 17, 2005	Feb 22, 2005
	COST 920 Working Group 3: Quantitative Risk Assessment, COST Action 920	Inventory of QMRA Studies in Europe Listing of quantitative microbiological risk assessments, organized by pathogen and country. Links to further (more)	Feb 8, 2005
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Microbiological Results of Raw Ground Beef Products Analyzed for Escherichia coli O157:H7 Calendar Year 2003 Information on each sample found positive for E. coli O157:H7 in the FSIS microbiological testing program. For each (more) Publication Date: Wednesday, April 12, 2006	Aug 7, 2002
	European Union Risk Analysis Information Network	Risk Assessment Database Database of data and study outcomes related to food safety risk assessment. Includes information on Salmonella, (more)	Oct 8, 2004

Listeria

Format	Author(s)	Title / Description	Date added	Details
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Food and Drug Safety Priority Area 12 Data used for the Food and Drug Safety Progress Review, including data on infections from foodborne Salmonella, (more)	May 28, 2002
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	COST 920 Working Group 3: Quantitative Risk Assessment, COST Action 920	Inventory of QMRA Studies in Europe Listing of quantitative microbiological risk assessments, organized by pathogen and country. Links to further (more)	Feb 8, 2005
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Microbiological Testing Programs for Ready-to-Eat (RTE) Meat and Poultry Products Information about and tables of data from FSIS's microbiological testing programs on RTE meat and poultry products. (more)	Oct 20, 2003
	Food Safety Laboratory, Cornell University	Pathogen Tracker 2.0 Database on bacterial subtypes, strains, and characteristics, with an emphasis on foodborne pathogens (especially L. (more)	Aug 7, 2002
	European Union Risk Analysis Information Network	Risk Assessment Database Database of data and study outcomes related to food safety risk assessment. Includes information on Salmonella, (more)	Oct 8, 2004
	Listeria monocytogenes Risk Assessment Team, Center for Food Safety and Applied Nutrition, Food and Drug Administration/Food Safety and Inspection Service, U.S. Department of Agriculture	Structure and Initial Data Survey for the Risk Assessment of the Public Health Impact of Foodborne Listeria monocytogenes This document provides information on the L. monocytogenes risk assessment after the structure was developed and the (more) Publication Date: Thursday, May 13, 1999	Aug 26, 2002
	National Food Processors Association	Survey of Listeria Monocytogenes in Ready to Eat Foods The National Food Processors Association (NFPA) conducted this study with the purpose of addressing uncertainties in (more) Publication Month: March 2003	Mar 27, 2003

Salmonella

Format	Author(s)	Title / Description	Date added	Details
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Food and Drug Safety Priority Area 12 Data used for the Food and Drug Safety Progress Review, including data on infections from foodborne Salmonella, (more)	May 28, 2002
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	Food Safety and Inspection Service, U.S. Department of Agriculture	Generic E. coli and Salmonella Baseline Results FSIS is releasing its data regarding E. coli and Salmonella from studies conducted between 1997 and 2000. This notice (more) Publication Date: Thursday, February 17, 2005	Feb 22, 2005
	Global Salm-Surv, World Health Organization	Global Salm-Surv Global Salm-Surv Country databank on Salmonella serotypes. Deadline: Tuesday, December 13, 2005	Dec 13, 2005
	Division of Data Services, National Center for Health Statistics, Centers for Disease Control and Prevention	Infectious Disease Statistics and data on annual infectious disease rates, including rates for Salmonella.	May 28, 2002
	COST 920 Working Group 3: Quantitative Risk Assessment, COST Action 920	Inventory of QMRA Studies in Europe Listing of quantitative microbiological risk assessments, organized by pathogen and country. Links to further (more)	Feb 8, 2005
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Microbiological Testing Programs for Ready-to-Eat (RTE) Meat and Poultry Products Information about and tables of data from FSIS's microbiological testing programs on RTE meat and poultry products. (more)	Oct 20, 2003
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Progress Report on Salmonella Testing of Raw Meat and Poultry Products, 1998-2001 This report describes the process for testing products for Salmonella to verify that industry Pathogen (more) Publication Month: April 2002	Aug 8, 2002
	Office of Public Health and Science, Food Safety and Inspection Service, U.S. Department of Agriculture	Progress Report on Salmonella Testing of Raw Meat and Poultry Products, 1998-2002 This report describes the process for testing products for Salmonella to verify that industry Pathogen (more) Publication Month: April 2003	Jun 7, 2003
	Food Safety and Inspection Service, U.S. Department of Agriculture	Progress Report on Salmonella Testing of Raw Meat and Poultry Products, 1998-2003 This report describes the process for testing products for Salmonella to verify that industry Pathogen (more)	Aug 6, 2004

Other Bacteria

Format	Author(s)	Title / Description	Date added	Details
	Food Safety and Inspection Service, U.S. Department of Agriculture	Baseline Data Collection Program Baseline microbiological data for foodborne pathogens on animal carcasses.	Aug 31, 2001
	Skinner, Guy E.	C. Botulinum Bibliography Bibliography of resources related to Clostridium botulinum.	Dec 13, 2004
	Microbiology Network	Culture Collections List of databases on various bacteria and viruses, also biotechnology.	Aug 31, 2001
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	COST 920 Working Group 3: Quantitative Risk Assessment, COST Action 920	Inventory of QMRA Studies in Europe Listing of quantitative microbiological risk assessments, organized by pathogen and country. Links to further (more)	Feb 8, 2005
	Food Safety Laboratory, Cornell University	Pathogen Tracker 2.0 Database on bacterial subtypes, strains, and characteristics, with an emphasis on foodborne pathogens (especially L. (more)	Aug 7, 2002
	European Union Risk Analysis Information Network	Risk Assessment Database Database of data and study outcomes related to food safety risk assessment. Includes information on Salmonella, (more)	Oct 8, 2004

Prions

Format	Author(s)	Title / Description	Date added	Details
	Center for Food Safety and Applied Nutrition, Food and Drug Administration/RTI	Animal-Derived Cosmetic Ingredient Database RTI, under contract with FDA, constructed this database on cosmetic ingredients that could potentially be derived (more) Publication Month: April 2002	Feb 17, 2004
	British Food Standards Agency	BSE Incidence Worldwide Confirmed cases of BSE for many European countries. Data begins in 1999.	Jul 10, 2002
	United Kingdom Department for Environment Food and Rural Affairs	DEFRA BSE: Statistics This site provides statistics for BSE and other TSEs, mostly in Great Britain.	Apr 9, 2003
	Center for Food Safety and Applied Nutrition, Food and Drug Administration	Foodborne Pathogenic Microorganisms and Natural Toxins Handbook: The "Bad Bug Book" Handbook with information on foodborne pathogenic microorganisms and natural toxins, including information on the (more) Publication Month: January 1992	Aug 31, 2001
	Center for Food Safety and Applied Nutrition, Food and Drug Administration/RTI	Identification of Animal Ingredients in Dietary Supplements Database RTI, under contract with FDA, constructed this database on dietary supplement products sold on the Internet that (more) Publication Month: August 2002	Mar 1, 2004
	Health and Consumer Protection Directorate-General, European Commission	Monthly Reports of Member States on BSE and Scrapie Tables of monthly testing data for BSE in cattle and scrapie and sheep and goats in the EU.	Jan 14, 2003